Motif Scan in a Protein Sequence

result

Query

Protein sequence:

>RAW_SEQUENCE
AESDKINIDSIIQRLLEVKGSRPGKNVQLTEQEIRGLCLKSREIFLSQPILLELEAPLKI
CGDVHGQYYDLLRLFEYGGYPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLL
RGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQ
SMEQIRRVMRPTDVPDQGLLCDLLWADPDDVMGWGENDRGVSFKTFGSDVVAKFLHKHDM
DLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEK
KVLSYGGAGGFGNSRPVTPPRNTAKGGKAKK

Databases: Prosite profiles (weekly-update)

...scanning for weekly_profile

Result

Summary:

prf:PHOSPHO_ESTER

pos. 56 - 254

normalized_score=20.027

Match Location:

query AESDKINIDSIIQRLLEVKGSRPGKNVQLTEQEIRGLCLKSREIFLSQPILLELEAPLKICGDVHGQYYDLLRLFEYGGY prf:PHOSPHO_ESTER <======================== query PPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPV prf:PHOSPHO_ESTER ================================================================================ query AAIVDEKIFCCHGGLSPDLQSMEQIRRVMRPTDVPDQGLLCDLLWADPDDVMGWGENDRGVSFKTFGSDVVAKFLHKHDM prf:PHOSPHO_ESTER ================================================================================ query DLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKKVLSYGGAGGFGNSRPVTPP prf:PHOSPHO_ESTER =============> query RNTAKGGKAKK

Prosite profiles (weekly-update):

match detail	match score	motif information
	status: ! pos.: 56-254 raw-score = 3838 N-score = 20.027 E-value = 2.1e-13	`prf:PHOSPHO_ESTER` Metallo-phosphoesterase motif. PS50185 QDOC50185 InterPro.

raw text output explanation of !/?

To cite this service, please use:

Falquet L, Pagni M, Bucher P, Hulo N, Sigrist CJ, Hofmann K & Bairoch A. (2002) The PROSITE database, its status in 2002. Nucleic Acids Res. 30:235-238

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